CDS

Accession Number TCMCG011C19439
gbkey CDS
Protein Id XP_021904780.1
Location complement(join(1526541..1526699,1526969..>1527331))
Gene LOC110819776
GeneID 110819776
Organism Carica papaya

Protein

Length 173aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA264084
db_source XM_022049088.1
Definition CTD small phosphatase-like protein 2, partial [Carica papaya]

EGGNOG-MAPPER Annotation

COG_category K
Description Encodes a SCP1-like small phosphatase (SSP). Three SSPs form a unique group with long N-terminal extensions AT5G46410 (SSP4), AT5G11860 (SSP5), AT4G18140 (SSP4b). SSP4 and SSP4b were localized exclusively in the nuclei, whereas SSP5 accumulated in both nuclei and cytoplasm. All three SSPs encodes active CTD phosphatases like animal SCP1 family proteins, with distinct substrate specificities SSP4 and SSP4b could dephosphorylate both Ser2-PO(4) and Ser5-PO(4) of CTD, whereas SSP5 dephosphorylated only Ser5-PO(4)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01009        [VIEW IN KEGG]
KEGG_ko ko:K17616        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004721        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006470        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016311        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016791        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042578        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:  
TTCTCATGCTGTTATCTATTTGCAGAGACACTTGTTCATTCTACACTGGAGCATTGTGATGATGCACACTTCACATTTACAGTCTTTTTCAACATGAAGGAGCATACTGTGTATGTAAAACAGAGGCCTCACCTCCATACATTCCTGGAGAAAGTGGCAGAGATGTTTGAAGTTGTTATCTTCACAGCTAGTCAGAGCATTTATGCTGCACAGCTTTTGGATATACTGGATCCAGATGGAAAGTTCATATCTCGGCGAGTTTATCGTGAATCATGCATTTTCTCAGATGGCAGCTACACTAAAGATTTGACAGTTTTAGGTGTTGATCTTGCAAAAGTTGCTATAATTGATAATTCTCCACAGGTATTCAGGTTGCAAGTTAATAATGGAATTCCTATTAAGAGTTGGTTTGATGATCCATCAGATAATGCACTAATTTCCTTACTTCCTTTCTTAGAGACTCTGGTTGATGCTGATGATGTCCGTCCCATCATTGCAAAGAGATTTGGTAACAAGGAATAA
Protein:  
FSCCYLFAETLVHSTLEHCDDAHFTFTVFFNMKEHTVYVKQRPHLHTFLEKVAEMFEVVIFTASQSIYAAQLLDILDPDGKFISRRVYRESCIFSDGSYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIKSWFDDPSDNALISLLPFLETLVDADDVRPIIAKRFGNKE